rs1573621
Variant in the FOXA2 gene (Forkhead Box A2)
rs1573621 is a single nucleotide polymorphism (SNP) in the FOXA2 gene, involved in lung development / hepatic gene regulation. Variants at this position have been studied in relation to immune function, metabolism, and chronic illness.
This page is for educational and informational purposes only. Not a diagnostic tool. Always consult a qualified healthcare provider.
What is the rs1573621 variant?
rs1573621 is a SNP (single nucleotide polymorphism) in the FOXA2 (Forkhead Box A2) gene. It belongs to the Respiratory category and is part of the Respiratory & Lung Function biological cluster. FOXA2 encodes a pioneer transcription factor critical for lung, liver, and pancreatic gene regulation.
Biological role and pathway
This variant sits within the FOXA2 gene, which is involved in the lung development / hepatic gene regulation pathway. Genes within the Respiratory & Lung Function cluster work together to maintain balanced function across interconnected biological systems.
Variants in genes within this pathway may influence an individual's predisposition to altered function — particularly under conditions of physiological stress such as viral infection or prolonged illness.
rs1573621 and Long COVID / ME-CFS research
FOXA2 regulates surfactant gene expression and mucus production in the lung; variants may affect lung epithelial responses and COVID-19-associated pulmonary changes in Long COVID.
This information is based on published research and does not constitute medical advice. See references below.
Parent gene: FOXA2
rs1573621 is one of 1 known variant in the FOXA2 gene. To understand the full biological context of this variant, explore the parent gene page.
View FOXA2 gene page →Conditions studied in relation to rs1573621
Research into FOXA2 variants including rs1573621 has explored associations with the following conditions. These are areas of scientific investigation and do not imply causation.
Genetic insights from DNA data
Consumer DNA files from 23andMe, AncestryDNA, and MyHeritage contain raw SNP data. When you upload your file to ChronicDNA, the analysis engine checks your genotype against a curated panel of 80+ genes selected for their relevance to Long COVID, ME/CFS, and connected biological pathways - some of which may include FOXA2 and the rs1573621 variant.
The report is educational - it explains which variants you carry, what the research says about them, and how they fit into the biological pathways most relevant to chronic illness. Results are presented in plain English with appropriate scientific context, no medical jargon, no scare tactics. All results should be discussed with a qualified healthcare provider.
Frequently asked questions
What is the rs1573621 variant in the FOXA2 gene?
rs1573621 is a single nucleotide polymorphism (SNP) located in the FOXA2 (Forkhead Box A2) gene, which is involved in lung development / hepatic gene regulation. FOXA2 encodes a pioneer transcription factor critical for lung, liver, and pancreatic gene regulation.
How may the rs1573621 variant relate to Long COVID or ME/CFS?
FOXA2 regulates surfactant gene expression and mucus production in the lung; variants may affect lung epithelial responses and COVID-19-associated pulmonary changes in Long COVID.
Can a consumer DNA test detect the rs1573621 variant?
Many consumer DNA tests such as 23andMe, AncestryDNA, and MyHeritage genotype common SNPs. ChronicDNA analyses your raw DNA file and reports on variants studied in relation to chronic illness, immune function, and metabolism. This is not a diagnostic service — results are informational and educational only.
Find out if you carry the rs1573621 variant
Upload your DNA data from 23andMe, AncestryDNA, or MyHeritage and receive a personalised report covering >80 genes relevant to Long COVID and ME/CFS.
Get Your Personalised DNA ReportInformational and educational only · Not a diagnostic tool · GDPR compliant
References
The following publications were used in compiling the research context for FOXA2 and its variants. This is not an exhaustive literature review.
- [1]PMID: 33141942
- [2]Nature Genetics
- [3]Cell