Genetic Variants Database

Browse 1258 genetic variants (SNPs) related to Long COVID and ME/CFS, grouped by gene and biological category. Each variant page covers its biological context and relevance to chronic illness research.

Informational and educational purposes only. Not a diagnostic tool.

1258
Total Variants
848
Genes
52
Categories
324
High Priority

Acute Phase

1 variants across 1 genes
CRP(1 variant)

Adaptive Immunity

27 variants across 11 genes

Antiviral

21 variants across 19 genes
IFIT1(1 variant)
ISG15(1 variant)
USP18(1 variant)
ADAR(1 variant)
TBK1(1 variant)
MAVS(1 variant)
TREX1(1 variant)
SAMHD1(1 variant)
IKBKE(1 variant)
TMPRSS4(1 variant)
NRP1(1 variant)
NRP2(1 variant)
BSG(1 variant)
PPIA(1 variant)
NLRX1(1 variant)

Autonomic

24 variants across 19 genes
ADRB1(1 variant)
ADRB2(1 variant)
ADRA1A(1 variant)
ACE(1 variant)
NOS3(1 variant)
CHRNA7(1 variant)
AVPR1A(1 variant)
NPY(1 variant)
AVP(1 variant)
GJA5(1 variant)
KCNMA1(1 variant)
AGTR2(1 variant)
CHRM1(1 variant)
CHRM3(1 variant)

Autophagy

9 variants across 7 genes
BECN1(1 variant)
SQSTM1(1 variant)
ATG5(1 variant)
ATG7(1 variant)
ULK1(1 variant)

Cardiovascular

22 variants across 14 genes

Cell Adhesion

6 variants across 2 genes

Chemokine

22 variants across 16 genes
CXCL9(1 variant)
CXCL12(1 variant)
CXCL11(1 variant)
CCR5(1 variant)
IL8(2 variants)
CXCL1(1 variant)
CXCR3(1 variant)
CXCR4(1 variant)
CCL3(1 variant)
CCL4(1 variant)
CX3CL1(1 variant)

Circadian

14 variants across 9 genes

Circadian Rhythm

5 variants across 2 genes

Coagulation

61 variants across 35 genes

Complement

10 variants across 6 genes
C5(1 variant)
CR1(1 variant)

Connective Tissue

38 variants across 30 genes
COL3A1(1 variant)
FBN1(1 variant)
ELN(1 variant)
LOX(1 variant)
TIMP1(1 variant)
COL6A1(1 variant)
SPARC(1 variant)
HAS2(1 variant)
HYAL2(1 variant)
ITGB1(1 variant)
ITGAV(1 variant)
CHST3(1 variant)
HSPG2(1 variant)
ACAN(1 variant)
COL2A1(1 variant)
LOXL2(1 variant)
DCN(1 variant)
MMP13(1 variant)
MMP12(1 variant)
ADAMTS5(1 variant)
ACTA2(1 variant)
TAGLN(1 variant)

Dna Repair

13 variants across 7 genes

Drug Metabolism

27 variants across 19 genes

Epigenetics

9 variants across 8 genes
DNMT3A(1 variant)
TET2(1 variant)
EZH2(1 variant)
HDAC1(1 variant)
EP300(1 variant)
KAT6A(1 variant)
KDM6A(1 variant)

Genome Stability

17 variants across 8 genes

Gut Barrier

7 variants across 3 genes

Gut Microbiome

16 variants across 8 genes

Histamine

4 variants across 4 genes
DAO(1 variant)
HNMT(1 variant)
HRH1(1 variant)
HRH2(1 variant)

Hormonal

31 variants across 19 genes

Hpa Axis

13 variants across 7 genes

Immune Checkpoint

8 variants across 5 genes

Immune Presentation

11 variants across 9 genes
HLA-DRB1(1 variant)
HLA-B(1 variant)
HLA-C(1 variant)
B2M(1 variant)
HLA-DRB5(1 variant)

Immune Regulation

6 variants across 4 genes

Immune Signaling

178 variants across 131 genes
IL6(1 variant)
IL1B(1 variant)
IL10(1 variant)
TNF(1 variant)
IFNG(1 variant)
STAT3(1 variant)
STAT1(1 variant)
IL7R(1 variant)
IL2RA(1 variant)
TGFB1(1 variant)
IL4(1 variant)
IL13(1 variant)
IL12A(1 variant)
IL23A(1 variant)
IL15(1 variant)
IL21(1 variant)
IL22(1 variant)
IL31(1 variant)
IL6ST(1 variant)
IL10RA(1 variant)
IL5(1 variant)
IL9(1 variant)
IL25(1 variant)
IL27(1 variant)
IL37(1 variant)
TNFSF10(1 variant)
IL1R1(1 variant)
IL36RN(1 variant)
IL10RB(1 variant)
STAT5A(1 variant)
FYCO1(1 variant)
CXCR6(1 variant)
CCR1(1 variant)
CAMP(1 variant)
CD44(1 variant)
KLRB1(1 variant)
KLRK1(1 variant)
MICB(1 variant)
GZMB(1 variant)
CASP4(1 variant)
GSDMD(1 variant)
TBX21(1 variant)
RORC(1 variant)
CD40LG(1 variant)
IRF4(1 variant)
IRF8(1 variant)
SPI1(1 variant)
CSF1R(1 variant)
CSF2(1 variant)
SIGLEC1(1 variant)
LBP(1 variant)
CD163(1 variant)
MRC1(1 variant)
IL18R1(1 variant)
IKBKB(1 variant)
RELA(1 variant)
JUN(1 variant)
TRAC(1 variant)
HLA-E(1 variant)
KLRC1(1 variant)
LILRB1(1 variant)
C1QA(1 variant)
C4A(1 variant)
C4B(1 variant)
C5AR1(1 variant)
CFI(1 variant)
CD59(1 variant)
PTAFR(1 variant)
EPX(1 variant)
ELANE(1 variant)
CXCR1(1 variant)
CPA3(1 variant)
TYROBP(1 variant)
RUNX1(1 variant)
GATA1(1 variant)
KLF1(1 variant)
RIPK3(1 variant)
MLKL(1 variant)
S100A8(1 variant)
S100A9(1 variant)
CD47(1 variant)
SIRPA(1 variant)

Inflammation

7 variants across 3 genes

Innate Immunity

67 variants across 33 genes

Jak Stat

7 variants across 6 genes
JAK1(1 variant)
JAK2(1 variant)
SOCS1(1 variant)
SOCS3(1 variant)
JAK3(1 variant)

Lipid Metabolism

30 variants across 16 genes

Lymphocyte

14 variants across 12 genes
CD4(1 variant)
CD8A(1 variant)
CD19(1 variant)
CD28(1 variant)
LCK(1 variant)
ZAP70(1 variant)
RAG1(1 variant)
MS4A1(1 variant)
BCL6(1 variant)
AICDA(1 variant)

Mast Cell

6 variants across 4 genes

Metabolic

116 variants across 82 genes
PRKAA2(1 variant)
INS(2 variants)
SLC2A4(1 variant)
SLC2A1(1 variant)
HK1(1 variant)
LDHA(1 variant)
IDH1(1 variant)
IDH2(1 variant)
SUCLA2(1 variant)
UQCRC1(1 variant)
COX4I1(1 variant)
CYCS(1 variant)
ACO2(1 variant)
CS(1 variant)
FH(1 variant)
PCCA(1 variant)
MUT(1 variant)
ATIC(1 variant)
PRKAA1(1 variant)
APOC3(2 variants)
CYP7A1(1 variant)
SLC10A2(1 variant)
SELENOP(1 variant)
FTH1(1 variant)
FTL(1 variant)
FECH(1 variant)
ATP7A(1 variant)
KCNJ11(2 variants)
ADRB3(1 variant)
SLC5A1(1 variant)
SLC5A2(1 variant)
ALDOB(1 variant)
G6PC(1 variant)
PCK1(1 variant)
GOT1(1 variant)
CPS1(1 variant)
GLS(1 variant)
SLC1A5(1 variant)
SLC7A5(1 variant)
KYNU(1 variant)
HSD11B2(1 variant)
THPO(1 variant)
HBA1(1 variant)
HBB(2 variants)
PKLR(1 variant)
ABCB4(1 variant)
MTHFS(1 variant)
PDE3B(1 variant)

Metabolism

26 variants across 9 genes

Methylation

9 variants across 8 genes
MTR(1 variant)
MTRR(1 variant)
BHMT(1 variant)
CBS(1 variant)
COMT(1 variant)
AHCY(1 variant)
MAT1A(1 variant)

Mitochondrial

28 variants across 25 genes
NDUFS7(1 variant)
COX5A(1 variant)
COX7A2(1 variant)
ATP5F1(1 variant)
UCP2(1 variant)
UCP3(1 variant)
TFAM(1 variant)
SIRT3(1 variant)
NDUFV1(1 variant)
SDHA(1 variant)
UQCRC2(1 variant)
ATP5A1(1 variant)
CPT1A(1 variant)
ACADM(1 variant)
HADHA(1 variant)
ACADVL(1 variant)
NDUFA9(1 variant)
ATP5B(1 variant)
SDHB(1 variant)
POLG2(1 variant)

Mitochondrial Dynamics

2 variants across 2 genes
MFN2(1 variant)
DNM1L(1 variant)

Mitophagy

3 variants across 2 genes

Neuroendocrine

21 variants across 13 genes

Neurological

33 variants across 26 genes
CACNA1H(1 variant)
SCN1A(1 variant)
SCN8A(1 variant)
KCNQ2(1 variant)
ATP1A3(1 variant)
ATP2B2(1 variant)
TRPM2(1 variant)
PANX1(1 variant)
RAMP1(1 variant)
TAC1(1 variant)
P2RX4(1 variant)
S100B(1 variant)
NEFL(1 variant)
APP(1 variant)
GRN(2 variants)
ARC(1 variant)
HOMER1(1 variant)
GRM5(1 variant)
DLG4(1 variant)
GJA1(1 variant)

Neuroplasticity

14 variants across 9 genes

Neurotransmitter

45 variants across 31 genes
MAOA(2 variants)
MAOB(1 variant)
DRD4(1 variant)
IDO2(1 variant)
KMO(1 variant)
TDO2(1 variant)
TH(1 variant)
DDC(1 variant)
GAD1(1 variant)
GAD2(1 variant)
GABRA1(1 variant)
SLC6A1(1 variant)
DRD1(1 variant)
DRD3(1 variant)
DRD5(1 variant)
ACHE(1 variant)
CHAT(1 variant)
SLC5A7(1 variant)
PNMT(1 variant)

Oxidative Stress

40 variants across 31 genes
SOD2(1 variant)
GPX1(1 variant)
CAT(1 variant)
NQO1(1 variant)
GSTM1(1 variant)
GSTT1(1 variant)
PRDX1(1 variant)
TXN(1 variant)
GPX4(1 variant)
TXNRD1(1 variant)
MSRA(1 variant)
GPX3(1 variant)
HMOX2(1 variant)
GCLC(1 variant)
GCLM(1 variant)
GSR(1 variant)
PRDX2(1 variant)
PRDX3(1 variant)
TXNRD2(1 variant)
CYBB(1 variant)
NOX4(1 variant)
NCF1(1 variant)
MT1A(1 variant)

Pain Sensory

28 variants across 18 genes

Pharmacogenomics

13 variants across 8 genes

Respiratory

8 variants across 7 genes
MUC5AC(1 variant)
SFTPC(1 variant)
NKX2-1(1 variant)
FOXA2(1 variant)
ABCA3(1 variant)
DNAI1(1 variant)

Signaling

70 variants across 49 genes

Stress Response

1 variants across 1 genes
HSPA1A(1 variant)

Vascular

22 variants across 16 genes
VEGFA(1 variant)
VEGFB(1 variant)
FGF2(1 variant)
VCAM1(1 variant)
PDE5A(1 variant)
TEK(1 variant)
CDH5(1 variant)
CLDN5(1 variant)
OCLN(1 variant)
TJP1(1 variant)

Viral Defense

20 variants across 15 genes
OAS1(1 variant)
MX1(1 variant)
IRF3(1 variant)
MB21D1(1 variant)
OAS2(1 variant)
OAS3(1 variant)
MX2(1 variant)
IFNAR2(1 variant)
IRF9(1 variant)
IFNL1(1 variant)

Viral Entry

8 variants across 4 genes

Vitamin Metabolism

20 variants across 15 genes
GC(2 variants)
FOLR1(1 variant)
TCN2(1 variant)
RXRA(1 variant)
SLC19A1(1 variant)
DHFR(1 variant)
HAMP(1 variant)
TFRC(1 variant)
SLC11A2(1 variant)
TRPM7(1 variant)

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Informational and educational only · Not a diagnostic tool · GDPR compliant